Information for 8-TCCMGGSMWCTGSSSC (Motif 16)

A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
Reverse Opposite:
A C T G A T C G A T C G T A G C A T G C G T C A T C A G G C A T A C G T A T G C A G T C A G T C A C G T C T A G C T A G C T G A
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.801
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 24.1bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TCCMGGSMWCTGSSSC
NNNCTTTCCAGGAAA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCCMGGSMWCTGSSSC
--NAGGTCANTGACCT
 A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCCMGGSMWCTGSSSC
TTCCNGGAAG-------
 A C G T A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCCMGGSMWCTGSSSC-
-GTAGGTCACTGGGTCA
 A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C A C G T
A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCCMGGSMWCTGSSSC
TTTCCNGGAAAN------
 A C G T A C G T A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.49
Offset:-7
Orientation:forward strand
Alignment:-------TCCMGGSMWCTGSSSC
GGAGCTGTCCATGGTGCTGA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------TCCMGGSMWCTGSSSC
GGCGCTGTCCATGGTGCTGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----TCCMGGSMWCTGSSSC
ACCACTCTCGGTCAC------
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TCCMGGSMWCTGSSSC
--CAGGCCNNGGCCNN
 A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCCMGGSMWCTGSSSC
SCCTAGCAACAG----
 A G C T A G T C G A T C T G C A A C T G A C T G T A C G T G C A C G T A A G T C A C G T A T C G A T C G A T G C A T G C G T A C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T