Information for 21-RCTGGRSYATAAKGRG (Motif 40)

C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G
Reverse Opposite:
A G T C G A T C A G T C G T A C A C G T A G C T C T G A C G A T C T A G A T C G A G T C A G T C A G T C C G T A A C T G A G C T
p-value:1e-6
log p-value:-1.605e+01
Information Content per bp:1.833
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.6 +/- 33.3bp
Average Position of motif in Background71.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:RCTGGRSYATAAKGRG-----
----AAACATAATGAGGTTGC
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:RCTGGRSYATAAKGRG-----
----GACGATAATGAGCTTGC
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:RCTGGRSYATAAKGRG--
--------NTAATGAGCT
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RCTGGRSYATAAKGRG-
---GGGGCCCAAGGGGG
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G A C G T
A C G T A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RCTGGRSYATAAKGRG
WDNCTGGGCA--------
 A C G T A C G T C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:RCTGGRSYATAAKGRG----
---NNTNNACAATGGGANNN
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.51
Offset:7
Orientation:forward strand
Alignment:RCTGGRSYATAAKGRG
-------GKTAATGR-
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:RCTGGRSYATAAKGRG
--------NTAATTGG
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:RCTGGRSYATAAKGRG
--------TTAATTAG
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

ZNF410/MA0752.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:RCTGGRSYATAAKGRG-----
----GANTATTATGGGATGGA
 C T G A A G T C A C G T A C T G A C T G C T A G A T G C A G T C C G T A A G C T C T G A C G T A A C T G A C T G C T A G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A