Information for 3-ACAMTCAGAAGGTAAY (Motif 4)

C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
Reverse Opposite:
C T A G A C G T A C G T C G T A A G T C A T G C G C A T A C G T G T A C G C A T C T A G T G C A A C G T A C G T A T C G C G A T
p-value:1e-14
log p-value:-3.304e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 21.2bp
Average Position of motif in Background55.4 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY
CCACACAGCAGGAGA-
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY
CCAATCAA--------
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.52
Offset:8
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY
--------AAGGTCAC
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY
CCACACAGCAGGAGA-
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY---
--------CAGGTAAGTAT
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACAMTCAGAAGGTAAY
--DCTCAGCAGG----
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY
------TCAAGGTCAT
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ACAMTCAGAAGGTAAY
---AACAGATGGTCN-
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
A C G T A C G T A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY-
---------AGATAASR
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.49
Offset:9
Orientation:forward strand
Alignment:ACAMTCAGAAGGTAAY
---------AGGTCA-
 C G T A A T G C C G T A G T C A A C G T A G T C C G T A C A T G T C G A C G T A T A C G C T A G C G A T T G C A C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T