Information for 16-AAAGAGGGTAAGA (Motif 31)

C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C G T G T C A A G T C A G T C A G T C A G C T G T A C C G A T A C G T A C G T
p-value:1e-8
log p-value:-2.057e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.4 +/- 24.8bp
Average Position of motif in Background49.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAAGAGGGTAAGA--
----CAGGTAAGTAT
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTAAGA
-AAYTAGGTCA--
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAGAGGGTAAGA
TATAAGTAGGTCAA-
 A C G T A C G T C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTAAGA
-ATCAAGGTCA--
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAAGAGGGTAAGA
-----AGGTCA--
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAAGAGGGTAAGA
---AGRGGTCA--
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAGAGGGTAAGA-
AAAAAGCGGAAGTA
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTAAGA
-AAGAGGATTAG-
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAGAGGGTAAGA---
----TGGGGAAGGGCM
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAAGAGGGTAAGA----
NNTNNGGGGCGGNGNGN
 C G T A C G T A C G T A A C T G C T G A C T A G A C T G A C T G A C G T G T C A C G T A A C T G C T G A A C G T A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A