Information for 12-CTGTGCCATAGTAGGG (Motif 20)

A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C G T A C A G T C C G A T C G T A T A G C C G A T C G T A C G A T A C T G C T A G G T A C C G T A A G T C C G T A T C A G
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 16.3bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGTGCCATAGTAGGG
---TNCCATATATGG-
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
A C G T A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTGTGCCATAGTAGGG
-----CCTTTGTT---
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGCCATAGTAGGG
TGCTGAGTCATNNTG---
 A C G T A C G T A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGTGCCATAGTAGGG
HTGCTGAGTCAT-------
 A C G T A C G T A C G T A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGTGCCATAGTAGGG
-TGAGTCATTTC----
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTGTGCCATAGTAGGG-
---TNCCATATATGGNA
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTGTGCCATAGTAGGG
-----CCWTTGTYYB-
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTGTGCCATAGTAGGG
-----CCWTTGTY---
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGTGCCATAGTAGGG
-TGAGTCA--------
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTGTGCCATAGTAGGG
-----CCATTGTTYB-
 A G T C C G A T A C T G C G A T A C T G A G T C A G T C C G T A A C G T C G T A A T C G A C G T C G T A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T