Information for 11-GTGKTTAACCACATCA (Motif 19)

C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
Reverse Opposite:
C A G T A C T G G T C A A C G T A C T G A C G T C A T G A C T G C G A T C G A T G T C A C G T A G T A C A G T C C G T A G T A C
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.797
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 17.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GTGKTTAACCACATCA
-----AAACCACAGC-
 C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GTGKTTAACCACATCA
-----AAACCACANN-
 C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGKTTAACCACATCA
----NAAACCACAG--
 C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTGKTTAACCACATCA
CCTTAGTTAACTAAAAT-
 A C G T A C G T C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTGKTTAACCACATCA
----NWAACCACADNN
 C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGKTTAACCACATCA
ANNNCTAGTTAACNGNN---
 A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GTGKTTAACCACATCA
-----AAACCACAGAN
 C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGKTTAACCACATCA
ACTTAGTTAACTAAAAA-
 A C G T A C G T C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGKTTAACCACATCA
-TGTTTAC--------
 C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGKTTAACCACATCA
TTGTTTAC--------
 C A T G A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C G A T C G T C A A G T C C G T A A C G T G T A C G C T A
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T