Information for 7-CTGACCACTAGTGBCT (Motif 9)

T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T
Reverse Opposite:
C T G A C T A G T A G C A G T C G T C A A G T C A C G T C G T A A C T G C G A T A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-13
log p-value:-3.094e+01
Information Content per bp:1.826
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.1 +/- 23.2bp
Average Position of motif in Background64.9 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTGACCACTAGTGBCT-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGACCACTAGTGBCT-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTGACCACTAGTGBCT
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGACCACTAGTGBCT
-TGACCYCT-------
 T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTGACCACTAGTGBCT
NNNNTTGACCCCTNNNN---
 A C G T A C G T A C G T A C G T T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGACCACTAGTGBCT----
-TGACCTAAAGTAACCTCTG
 T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGACCACTAGTGBCT-
-TGACCTNTAGTAACCC
 T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T A C G T
A C G T G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGACCACTAGTGBCT--
-TGACCTTTCGTGACCTT
 T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T A C G T A C G T
A C G T A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGACCACTAGTGBCT
NTGCCCANNGGTNA--
 T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGACCACTAGTGBCT--
--AANTTCAAGTGGCTTN
 T A G C A C G T C T A G T G C A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C A G T A C T G A C T G A G T C A G C T A C G T A C G T
A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A