Information for 25-CCGCCGGCAGCMGGSG (Motif 49)

T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G A T A C T G A G T C G T A C A C T G A C T G A T G C A C T G A T C G
p-value:1e-6
log p-value:-1.422e+01
Information Content per bp:1.920
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 21.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGCCGGCAGCMGGSG------
--GCCASCAGGGGGCGCYVNNG
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCGCCGGCAGCMGGSG
ATTGCCTCAGGCAAT-----
 A C G T A C G T A C G T A C G T T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCGCCGGCAGCMGGSG---
----DCHCAGCAGGRGGCC
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGCCGGCAGCMGGSG---
TGGCCACCAGGGGGCGCTA
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCGCCGGCAGCMGGSG-
-----CACAGCAGGGGG
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ELK4/MA0076.2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCGCCGGCAGCMGGSG
--NCCGGAAGTGG---
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G
A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCGCCGGCAGCMGGSG
-----GACAGCTGCAG
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCGCCGGCAGCMGGSG--
-NNNNAGCAGCTGCTGAN
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGGCAGCMGGSG
CGCCTCAGGCA-------
 A C G T A C G T T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCGCCGGCAGCMGGSG
------NCAGCTGCTG
 T A G C A G T C A T C G A G T C A G T C A C T G A C T G A G T C C G T A A C T G A G T C G T A C A C T G A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G