Information for 24-TATGCATATGGAA (Motif 47)

A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
Reverse Opposite:
C A G T A G C T T A G C G A T C G T C A A C G T C G T A C A G T A C T G T G A C G C T A A C G T T G C A
p-value:1e-7
log p-value:-1.723e+01
Information Content per bp:1.679
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif149.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.8 +/- 31.1bp
Average Position of motif in Background43.5 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----TATGCATATGGAA
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TATGCATATGGAA
ATTTGCATAT----
 A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TATGCATATGGAA
-ATGMATATDC--
 A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TATGCATATGGAA
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TATGCATATGGAA
ATTTGCATAA----
 A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TATGCATATGGAA
ATTTGCATA-----
 A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TATGCATATGGAA
ATTTGCATA-----
 A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TATGCATATGGAA
AATTTGCATANT---
 A C G T A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TATGCATATGGAA
TNTAATTTGCATANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TATGCATATGGAA
---ACATATGG--
 A C G T T C G A C G A T A C T G A G T C G T C A G C A T C G T A C A G T C T A G A T C G T C G A G T C A
A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T