Information for 24-TWCWGCCMTCTKCTCA (Motif 43)

C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
Reverse Opposite:
A G C T A T C G C G T A A C T G G T A C C G T A T C A G C T G A A C T G A C T G A C T G A G T C C G T A C T A G G C A T G T C A
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.0 +/- 23.6bp
Average Position of motif in Background41.8 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TWCWGCCMTCTKCTCA---
ANAGTGCCACCTGGTGGCCA
 A C G T C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TWCWGCCMTCTKCTCA
----GCCATCTGTT--
 C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TWCWGCCMTCTKCTCA---
TAGCGCCCCCTGGTGGCCA
 C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TWCWGCCMTCTKCTCA-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TWCWGCCMTCTKCTCA
-GCNGCCATCTTG---
 C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TWCWGCCMTCTKCTCA
----ACCATCTGTT--
 C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TWCWGCCMTCTKCTCA
-GCCGCCATCTTG---
 C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TWCWGCCMTCTKCTCA
--CTGCCCGCA-----
 C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TWCWGCCMTCTKCTCA
----RCCATMTGTT--
 C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TWCWGCCMTCTKCTCA
GGTCCCGCCCCCTTCTC-
 A C G T A C G T C A G T C G T A A G T C C G A T A C T G A G T C A G T C G T A C G A C T A G T C A C G T A C T G A G T C A C G T T A G C T C G A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T