Information for 9-CTTGTTTCAG (Motif 40)

G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
Reverse Opposite:
T G A C A C G T A T C G C T G A T G C A C G T A G T A C G T C A C G T A A C T G
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.820
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif193.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets59.7 +/- 27.7bp
Average Position of motif in Background49.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTTGTTTCAG-
-TGGTTTCAGT
 G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTGTTTCAG
ATTGTTTAN-
 G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTGTTTCAG
ATTGTT----
 G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTGTTTCAG
ATTGTTA---
 G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTTGTTTCAG
CCATTGTTNY--
 A C G T A C G T G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTGTTTCAG
--TGAGTCA-
 G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTTTCAG---
TTTTTTTTCNNGTN
 A C G T G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G A C G T A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGTTTCAG
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A C G T G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

FOXF2/MA0030.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTGTTTCAG----
NTTGTTTACGTTNN
 G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G A C G T A C G T A C G T A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTGTTTCAG
-TTGTTTAC-
 G T A C G C A T A C G T A C T G C G A T A C G T A G C T A T G C T C G A A C T G
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T