Information for 22-GCCTACATGGGTGAAT (Motif 34)

A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
Reverse Opposite:
C T G A A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A A C G T A C T G A G C T C G T A A C T G A C T G A T G C
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 21.6bp
Average Position of motif in Background46.2 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCTACATGGGTGAAT
-AANTCATGCGTGAA-
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT
------AGGTGTGAAA
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT
---TGCGTGGGYG---
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT
-----AAGGTGTGAA-
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCTACATGGGTGAAT
GTCATGCHTGRCTGS--
 A C G T A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT---
--CTCCAGGGGTCAATTGA
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT--
-----AAGGTGTGAAAAT
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT
------AGGTGTGA--
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT
-----AAGGTGTKAA-
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCCTACATGGGTGAAT
------AGGTGTGAAM
 A T C G G T A C T A G C A C G T C T G A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G C G T A C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A