Information for 11-CCCAGAANGAGTG (Motif 31)

A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
Reverse Opposite:
T A G C G T C A A G T C A C G T A T G C A T C G A G C T A C G T A G T C C G A T A T C G A C T G T C A G
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.709
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif86.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets39.9 +/- 28.5bp
Average Position of motif in Background49.7 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCCAGAANGAGTG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCAGAANGAGTG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCCAGAANGAGTG
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCAGAANGAGTG
CACAGCAGGGGG-
 A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGAANGAGTG-
DCHCAGCAGGRGGCC
 A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGAANGAGTG
TGCCCAGNHW-----
 A C G T A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGAANGAGTG
DCTCAGCAGG----
 A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGAANGAGTG
ATGCCAGACN-----
 A C G T A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCAGAANGAGTG
TTTCCCAGAAN-----
 A C G T A C G T A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCAGAANGAGTG
ATTTCCAAGAA------
 A C G T A C G T A C G T A C G T A G T C G T A C A T G C C G T A A C T G G T C A C T G A T A G C T A C G C G T A C T A G A C G T A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T