Information for 20-CAGAGGAGAAGGAAGG (Motif 28)

G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G
Reverse Opposite:
G A T C G A T C A C G T A C G T A G T C G T A C C A G T A C G T A G T C G C A T A T G C G T A C G A C T T A G C G A C T A C T G
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.629
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif287.7
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets44.4 +/- 30.3bp
Average Position of motif in Background48.5 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGAGGAGAAGGAAGG-
-----GAAAGTGAAAGT
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGAGGAGAAGGAAGG-----
AAANNGAAAGTGAAAGTAAAN
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CAGAGGAGAAGGAAGG
------AVCAGGAAGT
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAGAGGAGAAGGAAGG---
----AGAAAGTGAAAGTGA
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGAGGAGAAGGAAGG-
-----GAAASYGAAASY
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CAGAGGAGAAGGAAGG
------ANCAGGAAGT
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGAGGAGAAGGAAGG-
-----GAAAGTGAAAGT
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGAGGAGAAGGAAGG---
----GGAAANTGAAACTNA
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGAGGAGAAGGAAGG
GGAAGGAAGGAAGGAAGG
 A C G T A C G T G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAGAGGAGAAGGAAGG-
-----GAAACTGAAACT
 G T A C C T G A A T C G C T G A A C T G T A C G C G T A T C A G G T C A G T C A A C T G C T A G G T C A G T C A C T A G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T