Information for 5-AGAACACTAT (Motif 27)

C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T
Reverse Opposite:
C G T A G A C T C G T A T C A G A C G T C T A G A C G T A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.863
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif88.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets56.6 +/- 29.3bp
Average Position of motif in Background47.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AGAACACTAT---
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGAACACTAT---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGAACACTAT----
AAGAACATWHTGTTC
 A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AGAACACTAT
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------AGAACACTAT
TATCATTAGAACGCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAACACTAT----
VAGRACAKWCTGTYC
 A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGAACACTAT
CCAGGAACAG---
 A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGAACACTAT----
TAGTGAACAATAGATTT
 A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGAACACTAT----
TNNAGAACAATANATNN
 A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGAACACTAT--
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A A G T C C G T A A G T C A C G T C T G A C G A T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A