Information for 2-GCGCCCTCTA (Motif 2)

T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A
Reverse Opposite:
C G A T C G T A T A C G C T G A A C T G A T C G A T C G G A T C T C A G A T G C
p-value:1e-16
log p-value:-3.897e+01
Information Content per bp:1.677
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif360.3
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets52.3 +/- 22.6bp
Average Position of motif in Background51.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GCGCCCTCTA-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCGCCCTCTA---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCTCTA
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCCTCTA-------
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCCTCTA
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCCTCTA
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCTCTA-------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCGCCCTCTA
GCCMCGCCCMCY-
 A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCTCTA
AGCGCGCC-----
 A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCTCTA
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C T A G T A G C A T G C T G A C A G C T A T G C G C A T G C T A
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A