Information for 6-WCRAGGCGCTGCM (Motif 19)

C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T G A C T A C T G C G T A
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.892
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.6 +/- 27.1bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WCRAGGCGCTGCM-----
-AATCGCACTGCATTCCG
 C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:WCRAGGCGCTGCM--
CAAAGGCGTGGCCAG
 C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:WCRAGGCGCTGCM
------NGCTN--
 C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:WCRAGGCGCTGCM
-GGGGGCGGGGCC
 C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:WCRAGGCGCTGCM
---AGCAGCTGCT
 C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-WCRAGGCGCTGCM--
GCGGAGGTGTCGCCTC
 A C G T C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-WCRAGGCGCTGCM-
ATAAAGGCGCGCGAT
 A C G T C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--WCRAGGCGCTGCM
NNGCNCTGCGCGGC-
 A C G T A C G T C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:WCRAGGCGCTGCM
----GGCGCGCT-
 C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:WCRAGGCGCTGCM-----
---AGATGCTRCTRCCHT
 C G A T A G T C C T A G C G T A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A G T C T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T