Information for 12-ATRCARTTAATSACTK (Motif 16)

C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
Reverse Opposite:
G T A C C G T A C T A G A C G T T A G C G T C A A G C T A G C T C G T A G T C A A G C T A G C T T C A G A G T C G C T A G A C T
p-value:1e-11
log p-value:-2.730e+01
Information Content per bp:1.702
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 22.5bp
Average Position of motif in Background48.9 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd8/MA0910.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATRCARTTAATSACTK
TAAATAATTAATGGCTA
 A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATRCARTTAATSACTK
TAAATAATTAATGGCTA
 A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

Hmx2/MA0897.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATRCARTTAATSACTK
ACAAGCAATTAAAGAAT-
 A C G T A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T A C G T

PH0042.1_Hmx2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATRCARTTAATSACTK
ACAAGCAATTAAAGAAT-
 A C G T A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATRCARTTAATSACTK
ACAAGCAATTAATGAAT-
 A C G T A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATRCARTTAATSACTK
ACAAGCAATTAATGAAT-
 A C G T A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATRCARTTAATSACTK--
--NNAATTAATGACCNNN
 C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G A C G T A C G T
A C G T A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0172.1_Tlx2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATRCARTTAATSACTK
TAATTAATTAATAACTA
 A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATRCARTTAATSACTK
ACAAGCAATTAAAGAAT-
 A C G T A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATRCARTTAATSACTK
ACAAGCAATTAAAGAAT-
 A C G T A C G T C T G A C G A T C T A G A G T C T C G A C T G A A C G T C G A T C T G A T C G A A C G T A T C G G T C A G A T C C G A T A C T G
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T