Information for 9-TGWCWTTTMCYCAGWT (Motif 12)

C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
Reverse Opposite:
T C G A C G T A A T G C C G A T A C T G C T A G T C A G A C T G G T C A C G T A C G T A C G A T T C A G G C T A T G A C C G T A
p-value:1e-12
log p-value:-2.819e+01
Information Content per bp:1.654
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif54.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.9 +/- 20.4bp
Average Position of motif in Background45.4 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTGCCCTA--
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTNCNT----
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTGCCCCA--
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTGCCCTAN-
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGGACTTTGNNCTCN-
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTGACCCC--
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTGACCTN--
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTGACCCC--
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGACCTTTGACCCC--
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGWCWTTTMCYCAGWT
TGGACTTTGNNCTNTG
 C G A T A C T G C G A T A G T C G C T A A C G T A C G T A C G T T G A C A G T C G A T C A G T C G C T A A T C G G C A T A G C T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G