Information for 7-GGGAAATCCC (Motif 7)

C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C
Reverse Opposite:
A C T G C A T G A C T G T C G A G C A T A C G T C G A T A T G C A G T C G A T C
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.828
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif131.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets55.0 +/- 23.3bp
Average Position of motif in Background47.3 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GGGAAATCCC--
GGGAAATCCCCN
 C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:GGGAAATCCC-
-GGAAANCCCC
 C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:GGGAAATCCC-
-GGAAATTCCC
 C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GGGAAATCCC-
-GGAAATCCCC
 C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GGGAAATCCC-
-GGAAATTCCC
 C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATCCC-
GGGGGAATCCCC
 A C G T C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATCCC--
AGGGGAATCCCCT
 A C G T C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATCCC--
AGGGGAATCCCCT
 A C G T C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATCCC-----
AGGCTAATCCCCAANG
 A C G T C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGGAAATCCC-
---TAATCCCN
 C T A G C T A G A T C G C G T A C G T A C G T A A G C T G T A C G A T C A G T C A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G