Information for 6-GCCCTCTRGTGGA (Motif 5)

C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
Reverse Opposite:
C G A T G T A C A G T C T G C A A T G C G A T C C T G A A C T G C T G A C A T G A C T G A C T G G T A C
p-value:1e-19
log p-value:-4.568e+01
Information Content per bp:1.707
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif76.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets49.0 +/- 28.4bp
Average Position of motif in Background45.2 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.88
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTRGTGGA
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTRGTGGA--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTRGTGGA--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCCCTCTRGTGGA
GCCATCTGTT---
 C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCCTCTRGTGGA
ACCATCTGTT---
 C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCCTCTRGTGGA
RCCATMTGTT---
 C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTRGTGGA
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCCTCTRGTGGA
CGACCATCTGTT---
 A C G T A C G T C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCTCTRGTGGA
GCCAGCTGBTNB-
 C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCTCTRGTGGA-
CCCCCCCGGGGGNN
 C A T G G T A C A G T C G T A C A G C T A G T C A G C T C T A G A T C G A C G T C T A G A C T G G C T A A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G