Information for 7-AGAAAACCCGACTCTT (Motif 16)

C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C T G C A G T A T G C A C T G A C T G A C T G C G A T C G A T C G A T A C G T A G T C A G C T
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.5 +/- 32.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAAAACCCGACTCTT
GGAAANCCCC------
 C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGAAAACCCGACTCTT
GGAAATCCCC------
 C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAAAACCCGACTCTT
GGAAATTCCC------
 C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAACCCGACTCTT
GGGAAATCCCCN-----
 A C G T C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGAAAACCCGACTCTT-----
----TACGAGACTCCTCTAAC
 C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGAAAACCCGACTCTT
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGAAAACCCGACTCTT
GCAAAACATTACTA--
 C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAACCCGACTCTT
NNCNTGACCCCGCTCT-
 A C G T C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AGAAAACCCGACTCTT--
--NNAGTCCCACTCNNNN
 C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGAAAACCCGACTCTT
GGAAATTCCC------
 C T G A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A G T C A T C G G C T A A G T C G A C T A G T C A C G T A C G T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T