Information for 9-CACAAGAGCT (Motif 13)

T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
Reverse Opposite:
C G T A C T A G A T G C C A G T A G T C A G C T A G C T A C T G C G A T A C T G
p-value:1e-9
log p-value:-2.266e+01
Information Content per bp:1.780
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif232.7
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets41.8 +/- 24.5bp
Average Position of motif in Background51.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACAAGAGCT
GTCACATGAY--
 A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACAAGAGCT-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

TFEC/MA0871.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACAAGAGCT
ATCACGTGAC--
 A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACAAGAGCT
RNAACAATGG--
 A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACAAGAGCT
ATCACGTGAC--
 A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CACAAGAGCT
NWAACCACADNN---
 A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACAAGAGCT
GGTCACGTGG---
 A C G T A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CACAAGAGCT-
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Tcf21/MA0832.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACAAGAGCT-----
-GCAACAGCTGTTGT
 T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACAAGAGCT
CTYRAGTGSY
 T G A C G C T A T G A C T C G A C T G A C T A G G T C A T A C G A G T C C G A T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C