Information for 10-CATGTTACATTTC (Motif 11)

A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A C G A T A C T G A C G T G C T A C G T A A G T C C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 8.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CATGTTACATTTC
NTTGATACATT--
 A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATGTTACATTTC
GTCATGTGACC----
 A C G T A C G T A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACATTTC
AATATACATGTAAAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATGTTACATTTC
RTCATGTGAC-----
 A C G T A C G T A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACATTTC
TAAATACATGTAAAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACATTTC
AAAATACATGTAAAAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CATGTTACATTTC--
---GTTTCACTTCCG
 A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CATGTTACATTTC---
----TGACCTTTNCNT
 A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACATTTC
AATATACATGTAAAACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACATTTC
AAAATACATGTAATACT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C G A T C A G T C G T A A G T C C G T A A C G T A C G T A C G T A G T C
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T