Information for 13-ATTTCAATCT (Motif 19)

C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A A G C T
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.942
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets22.0 +/- 22.3bp
Average Position of motif in Background44.3 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATTTCAATCT-
-TTTGAAACCG
 C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATTTCAATCT
ATTTGAATT-
 C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAATCT----
GAAGATCAATCACTAA
 A C G T A C G T C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATTTCAATCT--
NAGATWNBNATCTNN
 A C G T A C G T A C G T C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAATCT----
GAAGATCAATCACTTA
 A C G T A C G T C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATTTCAATCT-----
CTTTCANTATGACTV
 C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAATCT------
NAGTTTCABTHTGACTNW
 A C G T A C G T C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTTCAATCT--
CCATCAATCAAA
 C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCAATCT
TGGTTTCAGT--
 A C G T A C G T C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATTTCAATCT---
---CAAATCACTG
 C T G A A C G T C G A T A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G