p-value: | 1e-8 |
log p-value: | -1.885e+01 |
Information Content per bp: | 1.875 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 4.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 33.0 +/- 17.7bp |
Average Position of motif in Background | 49.7 +/- 18.3bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGATATGCTGCTG---- --AGATGCTRCTRCCHT |
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PB0050.1_Osr1_1/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGATATGCTGCTG----- --TNNTGCTACTGTNNNN |
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PB0051.1_Osr2_1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGATATGCTGCTG----- --CNNNGCTACTGTANNN |
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PB0121.1_Foxj3_2/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGATATGCTGCTG NNCTTTGTTTTGNTNNN- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGATATGCTGCTG----- ---TNTCCTGCTGTGNNG |
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PB0105.1_Arid3a_2/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGATATGCTGCTG NNATNTGATANNNNN--- |
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SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGATATGCTGCTG -----ANCAGCTG |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGATATGCTGCTG----- ---NNTCCTGCTGTGNNN |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGATATGCTGCTG----- ---TCNCCTGCTGNGNNN |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGATATGCTGCTG-- ---CCCCCTGCTGTG |
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