Information for 9-TGAACATGTGACATTT (Motif 13)

G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T
Reverse Opposite:
C T G A C T G A C G T A C G A T A C T G A G C T A T G C G T C A A G T C G T C A G C A T A T C G A C G T A C G T A T G C C T G A
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.794
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.7 +/- 16.4bp
Average Position of motif in Background36.2 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGAACATGTGACATTT----
----NNNGTGACCTTTGNNN
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAACATGTGACATTT
TGACCTTTTGACCTTT
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TGAACATGTGACATTT----
--------TGACCTTTNCNT
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGAACATGTGACATTT----
----NNNNTGACCTTTNNNN
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGAACATGTGACATTT
--RTCATGTGAC----
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T
A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGAACATGTGACATTT
TTGACCTTTTGACCTT-
 A C G T G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGAACATGTGACATTT
-------GTGACCTT-
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGAACATGTGACATTT
--GTCATGTGACC---
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T
A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGAACATGTGACATTT-
-AAAATGGCGCCATTTT
 G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGAACATGTGACATTT
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T G A C T A T C G C G T A C G T A T A G C C G T A A C G T A C T G A C G T A T C G C T G A A G T C C G T A G A C T A G C T A G C T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T