Information for 19-TTCGCCTACT (Motif 40)

A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T
Reverse Opposite:
C G T A C T A G A C G T C G T A A C T G A C T G A T G C C T A G C T G A G T C A
p-value:1e-7
log p-value:-1.804e+01
Information Content per bp:1.862
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif50.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets47.5 +/- 28.8bp
Average Position of motif in Background53.8 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCGCCTACT
TTCCCCCTAC-
 A C G T A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCCTACT
GCTCCGCCCMCY
 A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTCGCCTACT------
-TNTCCTGCTGTGNNG
 A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTCGCCTACT------
-TCNCCTGCTGNGNNN
 A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCGCCTACT---
-CCCCCTGCTGTG
 A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTCGCCTACT----
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCCTACT
AATTTGCATANT
 A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCGCCTACT--
YCCGCCCACGCN
 A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGCCTACT-
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGCCTACT-
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A T C G A G T C A G T C A C G T T G C A A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A