Information for 5-CCAAGTCDGCTCCCGC (Motif 4)

A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C C T A G A C T G A T C G C G T A A C T G A G T C G C T A A C T G C G T A A T G C A C G T A C G T T C A G A C T G
p-value:1e-26
log p-value:-6.015e+01
Information Content per bp:1.831
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.1 +/- 25.9bp
Average Position of motif in Background55.0 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:8
Orientation:forward strand
Alignment:CCAAGTCDGCTCCCGC
--------GCTCCG--
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CCAAGTCDGCTCCCGC--
--------GGTCCCGCCC
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGTCDGCTCCCGC
TGCTGASTCAGC------
 A C G T A C G T A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCAAGTCDGCTCCCGC
-TGAGTCAGCA-----
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCAAGTCDGCTCCCGC
----AGCAGCTGCTNN
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCAAGTCDGCTCCCGC
-------NGCTN----
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCAAGTCDGCTCCCGC--
-------NCTTCCCGCCC
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCAAGTCDGCTCCCGC-
-------NYTTCCCGCC
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCAAGTCDGCTCCCGC
----CNGTCCTCCC--
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCAAGTCDGCTCCCGC--
-------NNTTCCCGCCC
 A G T C A G T C G T C A C G T A A T C G A C G T A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C