Information for 16-CCTCCTTGCTTGC (Motif 22)

A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C
Reverse Opposite:
A C T G G T A C C G T A C T G A C T A G G T A C C G T A C T G A A C T G A C T G G T C A C T A G A C T G
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.837
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.7 +/- 26.4bp
Average Position of motif in Background35.6 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCCTTGCTTGC
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCTCCTTGCTTGC
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCTCCTTGCTTGC--
-----TTGCGTGCVA
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCTCCTTGCTTGC
-NNACTTGCCTT-
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCTCCTTGCTTGC----
--CCATTGTATGCAAAT
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCTCCTTGCTTGC
-----TTGATTGN
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

FOXP3/MA0850.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCTCCTTGCTTGC
------TGTTTAC
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCTCCTTGCTTGC--
---SCHTGTTTACAT
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCTCCTTGCTTGC----
--TCCATGTTTACTTTG
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCTCCTTGCTTGC-
---TCCTGTTTACA
 A G T C A G T C A C G T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C G T C A T G A G T C A C G T
A C G T A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A