Motif 19

Information for 8-GCAGCTAGCT (Motif 19)

Reverse Opposite:

p-value:	1e-12
log p-value:	-2.984e+01
Information Content per bp:	1.621
Number of Target Sequences with motif	78.0
Percentage of Target Sequences with motif	8.56%
Number of Background Sequences with motif	1456.6
Percentage of Background Sequences with motif	3.34%
Average Position of motif in Targets	45.0 +/- 24.5bp
Average Position of motif in Background	51.1 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)	0.5
Multiplicity (# of sites on avg that occur together)	1.05
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.64
Offset:	0
Orientation:	reverse strand
Alignment:	GCAGCTAGCT-- GCCGCCATCTTG

POL010.1_DCE_S_III/Jaspar

Match Rank:	2
Score:	0.61
Offset:	1
Orientation:	forward strand
Alignment:	GCAGCTAGCT -CAGCC----

PB0126.1_Gata5_2/Jaspar

Match Rank:	3
Score:	0.61
Offset:	-2
Orientation:	reverse strand
Alignment:	--GCAGCTAGCT----- NNNCTGATATCTCNNNN

YY1/MA0095.2/Jaspar

Match Rank:	4
Score:	0.61
Offset:	0
Orientation:	reverse strand
Alignment:	GCAGCTAGCT-- GCNGCCATCTTG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:	5
Score:	0.59
Offset:	3
Orientation:	forward strand
Alignment:	GCAGCTAGCT--- ---GCCATCTGTT

PB0154.1_Osr1_2/Jaspar

Match Rank:	6
Score:	0.59
Offset:	-3
Orientation:	reverse strand
Alignment:	---GCAGCTAGCT--- NNNTTAGGTAGCNTNT

PB0155.1_Osr2_2/Jaspar

Match Rank:	7
Score:	0.58
Offset:	-3
Orientation:	reverse strand
Alignment:	---GCAGCTAGCT--- NNTGTAGGTAGCANNT

Myog/MA0500.1/Jaspar

Match Rank:	8
Score:	0.55
Offset:	-2
Orientation:	reverse strand
Alignment:	--GCAGCTAGCT NNGCAGCTGTC-

POL009.1_DCE_S_II/Jaspar

Match Rank:	9
Score:	0.55
Offset:	-1
Orientation:	reverse strand
Alignment:	-GCAGCTAGCT CACAGN-----

Tcf12/MA0521.1/Jaspar

Match Rank:	10
Score:	0.54
Offset:	-2
Orientation:	reverse strand
Alignment:	--GCAGCTAGCT NNGCAGCTGTT-