Information for 9-CGCAAAGTSCCGCGTG (Motif 12)

A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
Reverse Opposite:
G T A C G T C A T A G C A C T G A T G C C T A G C T A G A T C G T C G A A G T C A G C T G C A T A G C T C T A G T G A C C T A G
p-value:1e-18
log p-value:-4.147e+01
Information Content per bp:1.720
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 29.1bp
Average Position of motif in Background39.3 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGCAAAGTSCCGCGTG--
---NAGNTCTCGCGAGAN
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G A C G T A C G T
A C G T A C G T A C G T T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CGCAAAGTSCCGCGTG
GCGGAGGTGTCGCCTC
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CGCAAAGTSCCGCGTG
-----GGTCCCGCCC-
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CGCAAAGTSCCGCGTG
-GGAAATTCCC-----
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CGCAAAGTSCCGCGTG
-GGAAATTCCC-----
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAGTSCCGCGTG
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:7
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CGCAAAGTSCCGCGTG-
-----ATTCTCGCGAGA
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CGCAAAGTSCCGCGTG
----DTTTCCCGCC--
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CGCAAAGTSCCGCGTG
------TTCCCGCCWG
 A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CGCAAAGTSCCGCGTG
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G A T C C T G A C G T A C T G A A C T G A G C T A T G C A G T C A G T C A T C G A G T C A C T G C A G T A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T