Information for 21-GCCCGCGGCTGGACCC (Motif 44)

A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C T G A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.021e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.5 +/- 28.8bp
Average Position of motif in Background56.8 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCGGCTGGACCC
TGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GCCCGCGGCTGGACCC
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCGGCTGGACCC
NGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCGGCTGGACCC
NGCCTNAGGCN------
 A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCCGCGGCTGGACCC
ATTGCCTGAGGCAAT----
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCCCGCGGCTGGACCC
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCCGCGGCTGGACCC
-----GGGCGGGACC-
 A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCCCGCGGCTGGACCC
ATTGCCTCAGGCAAT----
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCCGCGGCTGGACCC
---CGTGGGTGGTCC-
 A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCCCGCGGCTGGACCC
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G C G T A A G T C A G T C A G T C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T