Information for 22-CTGCTGGGTG (Motif 42)

A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.159e+01
Information Content per bp:1.963
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.8 +/- 17.9bp
Average Position of motif in Background78.9 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTG-
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTG-
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTG
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CTGCTGGGTG
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGTG-
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGGGTG
CCTGCTGAGH-
 A C G T A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGGGTG--
RGSMTBCTGGGAAAT
 A C G T A C G T A C G T A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGCTGGGTG-----
----TGGGTGTGGCN
 A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTGCTGGGTG-----
---NTGGGTGTGGCC
 A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGCTGGGTG-------
GTATTGGGTGGGTAATT
 A G T C A C G T C T A G A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T