Information for 18-TGCCCTTGCG (Motif 41)

A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G
Reverse Opposite:
G T A C A C T G A G T C T C G A C T G A A C T G A T C G A C T G A G T C T C G A
p-value:1e-6
log p-value:-1.523e+01
Information Content per bp:1.845
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets42.7 +/- 28.3bp
Average Position of motif in Background52.3 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCTTGCG
BNTGDCCTTG--
 A C G T A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCCCTTGCG
TGACCTTGAN
 A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCCCTTGCG
TGACCTTGAV
 A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTTGCG
NTGACCTTGA-
 A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCCTTGCG--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTTGCG
ATGACCTTGA-
 A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCTTGCG---
GCTGACCTTGAACTN
 A C G T A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCTTGCG
NATGACCTTGA-
 A C G T A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTTGCG-
CTGCGCATGCGC
 A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTTGCG-
GTGCGCATGCGC
 A C G T A G C T A C T G G T A C A T G C A G T C A G C T A C G T A C T G T A G C A C T G A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C