Information for 9-GGGATTCCCC (Motif 30)

C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C
Reverse Opposite:
A T C G T A C G C T A G T C A G T C G A C G T A A G C T A G T C T G A C G T A C
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.656
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.25%
Number of Background Sequences with motif379.6
Percentage of Background Sequences with motif4.13%
Average Position of motif in Targets55.8 +/- 26.0bp
Average Position of motif in Background51.5 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTCCCC-
GGGGATTCCCCC
 A C G T C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCCC-
AGGGGATTCCCCT
 A C G T A C G T C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--GGGATTCCCC-
AGGGGATTCCCCT
 A C G T A C G T C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCCC
NGGGGATTTCCC
 A C G T A C G T C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGGATTCCCC
GGAAATCCCC
 C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:GGGATTCCCC-
-----TCCCCA
 C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGATTCCCC
GGGAATTTCC-
 A C G T C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGATTCCCC
GGGGATTTCC-
 A C G T C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGATTCCCC
GGAAATTCCC
 C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGATTCCCC--------
-AAATTCCCCCCGGAAGT
 C A T G A C T G T A C G T C G A G C A T A G C T A G T C G A T C A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T