Information for 2-AGCAAATGAG (Motif 2)

C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
Reverse Opposite:
G T A C A G C T A T G C T C G A A C G T A G C T A C G T T A C G T A G C A C G T
p-value:1e-16
log p-value:-3.885e+01
Information Content per bp:1.838
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.98%
Number of Background Sequences with motif274.3
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets49.5 +/- 25.7bp
Average Position of motif in Background48.8 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAATGAG
NACAGGAAAT---
 A C G T A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGCAAATGAG
AGCCAATCGG
 C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCAAATGAG
WATGCAAATGAG
 A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGCAAATGAG
AATATGCAAATTAG
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAATGAG
ATATGCAAATNNN
 A C G T A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAATGAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCAAATGAG
ACTAGCCAATCA-
 A C G T A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCAAATGAG
AGAGGAAGTG--
 A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCAAATGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCAAATGAG
NACAGGAAAT---
 A C G T A C G T A C G T C G T A A C T G A T G C G T C A C T G A T G C A A G C T A T C G C T G A A C T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T