Information for 4-GCTCTTCTCAGCARAH (Motif 13)

C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T
Reverse Opposite:
C G T A A C G T A G C T C A G T A C T G G T A C A G C T T C A G C T G A A C T G T C G A C G T A T A C G G C T A A C T G A G T C
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.680
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.1 +/- 28.5bp
Average Position of motif in Background46.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GCTCTTCTCAGCARAH-
------GTCAGCANNTN
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTCTTCTCAGCARAH--
---HWWGTCAGCAWWTTT
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTCTTCTCAGCARAH-
--CTGAGTCAGCAATTT
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T A C G T
A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCTCTTCTCAGCARAH-
-----NGTCAGCANTTT
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCTCTTCTCAGCARAH
---TTTCCCAGAAN--
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T
A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTCTTCTCAGCARAH
--NTTTCTNAGAAA--
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T
A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCTTCTCAGCARAH--
---CCACACAGCAGGAGA
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTCTTCTCAGCARAH-
--ANTTCTCAGGAANNN
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T A C G T
A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCTCTTCTCAGCARAH
-----DCTCAGCAGG-
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T
A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTCTTCTCAGCARAH---
-GCTGAGTCAGCAATTTTT
 C T A G T G A C C A G T A T G C G A C T A C G T A G T C A G C T A G T C C T G A A C T G A G T C G T C A C T G A T C G A G C A T A C G T A C G T A C G T
A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T