Information for 6-YTCCCCTTGTGAT (Motif 10)

A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A G A C T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G C G T A C T A G
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 26.8bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--YTCCCCTTGTGAT--
TGTTCCCATTGTGTACT
 A C G T A C G T A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:YTCCCCTTGTGAT
---CCTTTGTT--
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YTCCCCTTGTGAT
-TCCCCA------
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YTCCCCTTGTGAT
---CCWTTGTY--
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-YTCCCCTTGTGAT
TTCCCCCTAC----
 A C G T A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YTCCCCTTGTGAT
---CCWTTGTYYB
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:YTCCCCTTGTGAT
----CTTTGT---
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YTCCCCTTGTGAT
---CCATTGTTNY
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YTCCCCTTGTGAT
---CCATTGTTYB
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YTCCCCTTGTGAT
--NCCATTGTTC-
 A G T C A C G T A G T C A G T C A G T C G T A C A C G T G C A T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T