Information for 4-GTAATTACAA (Motif 4)

C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A
Reverse Opposite:
C G A T C G A T C T A G G A C T G C T A T C G A A G C T C G A T C T G A G T A C
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.534
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif18.01%
Number of Background Sequences with motif4775.7
Percentage of Background Sequences with motif10.10%
Average Position of motif in Targets50.9 +/- 25.7bp
Average Position of motif in Background49.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GTAATTACAA---
NNNGTAATTACNNATA
 A C G T A C G T A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0072.1_Hoxc8/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GTAATTACAA---
ACNNTAATTACNNCAN
 A C G T A C G T A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A A C G T A C G T A C G T
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PH0022.1_Dlx3/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTACAA--
TCGCGATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

MEOX1/MA0661.1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GTAATTACAA
GCTAATTAAC-
 A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A
T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTAATTACAA---
AAGGTAATTACCTAAT
 A C G T A C G T A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0071.1_Hoxc6/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GTAATTACAA---
CAAATTAATTAATAAAA
 A C G T A C G T A C G T A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A A C G T A C G T A C G T
A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTAATTACAA
AGTAATTAAC-
 A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTAATTACAA
GCAATTAA--
 C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:9
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GTAATTACAA---
GAGGTAATTACCTCAG
 A C G T A C G T A C G T C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A A C G T A C G T A C G T
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTAATTACAA
CCAATTAC--
 C A T G G A C T G C T A T C G A A G C T C G A T C T G A G A T C G C T A G C T A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T