Information for 10-CTGTGGGCACCTCCCT (Motif 19)

A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G C G T A A C T G A C T G A C G T A C T G A G T C A G T C A G T C C T G A A G T C C T G A A C T G
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.6 +/- 33.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGGCACCTCCCT
NNNNTTGGGCACNNCN--
 A C G T A C G T A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGTGGGCACCTCCCT
----SNGCACCTGCHS
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTGTGGGCACCTCCCT
------GCCCCGCCCC
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTGGGCACCTCCCT
-NGTGGGCAT------
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTGTGGGCACCTCCCT---
----NRGCCCCRCCCHBNN
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGTGGGCACCTCCCT
NNGGCGACACCTCNNN
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTGGGCACCTCCCT--
-NNNNGGTACCCCCCANN
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGTGGGCACCTCCCT
-----TACACCTGTC-
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTGTGGGCACCTCCCT-
------GCCCCGCCCCC
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGTGGGCACCTCCCT
----TGACACCT----
 A G T C A G C T C T A G A G C T C T A G A C T G C T A G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T