Information for 6-AATTTTAMAAAAC (Motif 4)

G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C
Reverse Opposite:
T C A G C G A T A C G T A G C T C G A T C A T G C G A T T C G A C G T A C G T A C G T A G C A T A C G T
p-value:1e-14
log p-value:-3.356e+01
Information Content per bp:1.688
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif103.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets52.9 +/- 28.3bp
Average Position of motif in Background52.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATTTTAMAAAAC
CTAATATTGCTAAA-
 A C G T A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATTTTAMAAAAC
CTAATATTGCTAAA-
 A C G T A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAMAAAAC--
NANTTATATATAANGN
 A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAMAAAAC
AAATAAGAAAAAAC
 A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AATTTTAMAAAAC-
NTNAATTTTATTGNATT
 A C G T A C G T A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATTTTAMAAAAC-
AATATTAATAAAGA
 G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATTTTAMAAAAC-
NNANTTTTATTGGNNN
 A C G T A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATTTTAMAAAAC
ANATTTTTGCAANTN
 A C G T A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAMAAAAC-
CCGTATTATAAACAA
 A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATTTTAMAAAAC
AAAATTGTTATGAA-
 A C G T A C G T G T C A C G T A C G A T C G A T C G A T A G C T C G T A G T A C C G T A T C G A T G C A G C T A A G T C
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T