Information for 13-CMATTTTCTG (Motif 25)

G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G G T C A G T C A T C G A C G T A A C G T A C T G C T A G
p-value:1e-4
log p-value:-9.848e+00
Information Content per bp:1.741
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif1145.3
Percentage of Background Sequences with motif2.45%
Average Position of motif in Targets53.8 +/- 24.4bp
Average Position of motif in Background49.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CMATTTTCTG-
---TWGTCTGV
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CMATTTTCTG--
--ATTTCCTGTN
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CMATTTTCTG-
-VBSYGTCTGG
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CMATTTTCTG-
---CTGTCTGG
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CMATTTTCTG----
----GGTCTGGCAT
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CMATTTTCTG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CMATTTTCTG--
--ATTTCCTGTN
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T A C G T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CMATTTTCTG
NCCTTATCTG
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CMATTTTCTG
CTCATTGTC--
 A C G T G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CMATTTTCTG--
------GCTGTG
 G A T C G T A C G T C A A C G T A G C T A C G T A C G T A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G