Information for 11-CACATGCATGTGT (Motif 18)

G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T
Reverse Opposite:
C T G A G T A C C T G A T A G C C G T A C A G T C T A G G A T C G T C A G A C T A C T G A G C T C A T G
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.633
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif141.7
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets52.8 +/- 22.5bp
Average Position of motif in Background48.0 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACATGCATGTGT--
NTTNTATGAATGTGNNC
 A C G T A C G T G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACATGCATGTGT---
-AYATGYATATGCATR
 G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T A C G T A C G T A C G T
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CACATGCATGTGT-
----GGCACGTGTC
 G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACATGCATGTGT
TTCATTTGCATAT--
 A C G T A C G T G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CACATGCATGTGT
-----GCACGTGT
 G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCATGTGT
GHATATKCAT----
 A C G T G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CACATGCATGTGT--
-----CCATGTGCTT
 G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Hes2/MA0616.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CACATGCATGTGT-----
-----GCACGTGTCNNNN
 G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACATGCATGTGT
NGKCACGTGM------
 A C G T A C G T A C G T G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCATGTGT
NNACTTGCCTT---
 A C G T G T A C C T G A G T A C C T G A A C G T C T A G G A T C G T C A G A C T A T C G A G C T C A T G G A C T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T