Information for 13-TATGTGCTATTGTTGC (Motif 26)

A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G G T A C C G T A A G T C C G T A A G C T C G T A
p-value:1e-4
log p-value:-1.096e+01
Information Content per bp:1.926
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.5 +/- 25.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:TATGTGCTATTGTTGC
------CCATTGTTC-
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATGTGCTATTGTTGC-----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TATGTGCTATTGTTGC
--------ATTGTTA-
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TATGTGCTATTGTTGC--
--ANNTCCATTGTTCNNN
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C A C G T A C G T
A C G T A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TATGTGCTATTGTTGC
------CCATTGTTNY
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TATGTGCTATTGTTGC
--------ATTGTT--
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TATGTGCTATTGTTGC----
---CNNNTATTGTTCNNNNN
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TATGTGCTATTGTTGC
-NNNTGTTGTTGTTNG
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TATGTGCTATTGTTGC
-----NCCATTGTTC-
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TATGTGCTATTGTTGC----
---AATCAATTGTTCCGCTA
 A C G T C T G A A C G T T A C G A C G T A C T G A G T C A C G T T G C A A C G T A C G T A C T G A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A