Information for 6-GTCGTKAAST (Motif 23)

A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T
Reverse Opposite:
C G T A A T C G A C G T A C G T G T A C C G T A A G T C A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.138e+01
Information Content per bp:1.897
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.4 +/- 25.6bp
Average Position of motif in Background54.8 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----GTCGTKAAST---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----GTCGTKAAST---
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTCGTKAAST
GGTCGTAAAAT
 A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----GTCGTKAAST--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:5
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTCGTKAAST-
GGTCGTAAAATT
 A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GTCGTKAAST--
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTCGTKAAST
GTCGTAAAAA
 A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTCGTKAAST
GTCGTAAAAT
 A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTCGTKAAST
GGTCGTAAAAA
 A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCGTKAAST---
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T C A G T C G T A C G T A T A C G A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C