p-value: | 1e-13 |
log p-value: | -3.047e+01 |
Information Content per bp: | 1.775 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 1.70% |
Number of Background Sequences with motif | 1.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 51.4 +/- 28.9bp |
Average Position of motif in Background | 54.1 +/- 10.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGACCTTAATAGTHT -TGACCTTGAT----- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGACCTTAATAGTHT NTGACCTTGA------ |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGACCTTAATAGTHT -TGACCTYA------- |
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PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTGACCTTAATAGTHT-- ----CCTTAATNGNTTTT |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGACCTTAATAGTHT ATGACCTTGA------ |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGACCTTAATAGTHT NATGACCTTGA------ |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTGACCTTAATAGTHT NNACTTACCTN-------- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTGACCTTAATAGTHT -TGACCT--------- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGACCTTAATAGTHT GTGACCTT-------- |
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Esrra/MA0592.2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGACCTTAATAGTHT ATGACCTTGAA----- |
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