Information for 2-GATATTTGAA (Motif 8)

T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A
Reverse Opposite:
A G C T A C G T T A G C C T G A C G T A C G T A C G A T G C T A C G A T A T G C
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.774
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.03%
Number of Background Sequences with motif411.1
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets51.1 +/- 27.8bp
Average Position of motif in Background51.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GATATTTGAA--
---ATTTGAATT
 T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GATATTTGAA--
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T A C G T T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GATATTTGAA----
----TTTGAAACCG
 T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GATATTTGAA
AAGGATATNTN--
 A C G T A C G T A C G T T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATATTTGAA-----
-AAATAAGAAAAAAC
 T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GATATTTGAA--
GWAAYHTGAKMC
 T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATATTTGAA--
CTAATATTGCTAAA
 A C G T A C G T T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATATTTGAA--
CTAATATTGCTAAA
 A C G T A C G T T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GATATTTGAA--
GWAAYHTGABMC
 T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GATATTTGAA-
--TATGCAAAT
 T A C G G C T A C G A T C G T A A C G T G C A T A G C T A T C G C G T A C T G A A C G T
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T