Information for 4-WCAKKTTTAATMWWWA (Motif 13)

C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A
Reverse Opposite:
C G A T G C A T C G T A C G A T C A G T C G T A A C G T A C G T C G T A T C G A C G T A G T A C G T C A A C G T A C T G C G A T
p-value:1e-7
log p-value:-1.673e+01
Information Content per bp:1.819
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 20.1bp
Average Position of motif in Background51.4 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA
-----TTTAAT-----
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA--
-NNNTTTTAATTAANNNN
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A A C G T A C G T
A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA--
------TTAATNATTAAC
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA-
---TCTTTANTAATANN
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A A C G T
A C G T A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA---
------TTAATGTTTAACC
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:WCAKKTTTAATMWWWA
---ATATTAATTAA--
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A
A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA--
-NNTTATTAATTAATNCN
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A A C G T A C G T
A C G T T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA
-NNTTTTTCTTATNT-
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WCAKKTTTAATMWWWA--
-NNTTTTTAATTAATTCG
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A A C G T A C G T
A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WCAKKTTTAATMWWWA--
-AGTTTTTAATTAATTTG
 C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A C G T A C G A T C G T A C G T A A C G T A C G T
A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G