Information for 1-CTCCACTGTCACT (Motif 1)

G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T
Reverse Opposite:
C T G A C T A G C G A T A C T G C T G A A T G C C G T A T A C G C A G T C A T G T A C G C G T A C T A G
p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.727
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif93.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets56.8 +/- 22.8bp
Average Position of motif in Background49.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:CTCCACTGTCACT
-----NTGTCAN-
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CTCCACTGTCACT
----CCTGTCAA-
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACTGTCACT---
NNNCAGCTGTCAATATN
 A C G T G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTCCACTGTCACT---
----NCTGTCAATCAN
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTCCACTGTCACT
-CCAACTGCCA--
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CTCCACTGTCACT
----GCTGTCAA-
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTCCACTGTCACT
---VGCTGWCAVB
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTCCACTGTCACT---
----SCTGTCAVTCAV
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTCCACTGTCACT---
----ACTTTCACTTTC
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTCCACTGTCACT
-----YTGWCADY
 G A T C G A C T A T G C G T A C G T C A A T G C C G A T A T C G A G C T G T A C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C